PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0144.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 282aa    MW: 31088.6 Da    PI: 6.7482
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0144.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY795.4e-25115174159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +dDgy WrKYGqK++ + ++prsYYrCt++ +C + k+v++++++p +  itY+++H+++
  Kaladp0037s0144.1.p 115 VDDGYGWRKYGQKPILNMKYPRSYYRCTHSdQCDALKQVQKTDDNPPTYMITYTNHHKCS 174
                          59****************************9***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-24107174IPR003657WRKY domain
SuperFamilySSF1182901.83E-23108175IPR003657WRKY domain
PROSITE profilePS5081120.289110171IPR003657WRKY domain
SMARTSM007748.6E-31115175IPR003657WRKY domain
PfamPF031063.7E-23116173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MVENSASDGV LSAIHELLNA RDSLNELLGL LGQQLHFSPP GALISATAHA VSVLGAFESS  60
LSLLSGERHA EAASQRAPTK SMISASSSLG VRRALYKGRS SRHKLSWTRH TPVLVDDGYG  120
WRKYGQKPIL NMKYPRSYYR CTHSDQCDAL KQVQKTDDNP PTYMITYTNH HKCSRSSSVE  180
DLQNPNYMDN GDSSLLINFA LQRATDHYCH NTPVKNLWPV KEEEDTGDKQ CLSPDDYLPS  240
TSHFQVSETQ HSDESGAAAS SVTTASHLFS YLDELRAFLL G*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-20WRKY DNA-binding protein 70